## clusterProfiler v3.18.0 For help: https://guangchuangyu.github.io/software/clusterProfiler ## ## If you use clusterProfiler in published research, please cite: ## Guangchuang Yu, Li-Gen Wang, Yanyan Han, Qing-Yu He. clusterProfiler: an R package for comparing biological themes among gene clusters. OMICS: A Journal of Integrative Biology. 2012, 16(5):284-287.
## ## Attaching package: 'clusterProfiler'
## The following object is masked from 'package:stats': ## ## filter
library(DOSE)
## DOSE v3.16.0 For help: https://guangchuangyu.github.io/software/DOSE ## ## If you use DOSE in published research, please cite: ## Guangchuang Yu, Li-Gen Wang, Guang-Rong Yan, Qing-Yu He. DOSE: an R/Bioconductor package for Disease Ontology Semantic and Enrichment analysis. Bioinformatics 2015, 31(4):608-609
library(enrichplot) data(geneList) de <-names(geneList)[1:100] x <-enrichDO(de)
2.问题重现
我的版本是1.4.0,画emapplot直接运行emapplot(X)即可
但学员运行时出了错
emapplot(x)
## Errorin has_pairsim(x): Term similarity matrix not available. Please use pairwise_termsim functionto deal with the results of enrichment analysis.