10 Resources
专题介绍:单细胞RNA-seq被评为2018年重大科研进展,但实际上这是老技术。2015年,商品化单细胞RNA测序流程已经建立,成果发表在Cell上。今年井喷式发文章,关注点那么高,是因为最近这项技术全面商品化了。
10.1 Orchestrating Single-Cell Analysis with Bioconductor
10.2 scRNA-seq Protocols
10.3 External RNA Control Consortium (ERCC)
10.4 scRNA-seq analysis tools
Extensive list of software packages (and the people developing these methods) for single-cell data analysis:
Tallulah Andrews’ single cell processing scripts:
Various tools from 10x Genomics:
10.5 scRNA-seq public datasets
专题:单细胞RNA-seq测序数据分析:
- 1 About the course 关于单细胞测序跟练课程
- 2 单细胞RNA-seq介绍
- 3 Processing Raw scRNA-Seq Sequencing Data: From Reads to a Count Matrix处理scRNA-seq测序的原始数据:把读取的数据转化为计数矩阵
- 5 scRNA-seq Analysis with Bioconductor
- 6 Basic Quality Control (QC) and Exploration of scRNA-seq Datasets
- 7 Biological Analysis
- 8 Single cell RNA-seq analysis using Seurat
- 9 scRNA-seq Dataset Integration
- 10 Resources
- 11 References
- 单细胞RNA-seq测序分析-跟练
- 谈谈单细胞测序那些事儿
- 【单细胞技术贴】空间转录组与单细胞转录组的整合分析(上篇)
- 【单细胞技术贴】空间转录组与单细胞转录组的整合分析(下篇)
- 【单细胞数据分析】SCENIC 从单细胞数据推断基因调控网络和细胞类型
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